Browse of TCMCG051C20304 protein

CDS

Accession Number	TCMCG051C20304
gbkey	CDS
Protein Id	XP_006381355.2
Location	join(9461627..9461767,9461855..9461953,9462674..9462748,9462848..9462952,9463024..9463134,9464806..9464965,9465569..9465654,9465806..9465928,9466018..9466227,9466765..9466854,9467156..9467317,9467616..9467732,9467830..9468030,9468411..9468512,9468649..9468792,9469415..9469545,9469628..9469747,9470039..9470162,9471388..9471585,9473000..9473118,9473829..9473979,9474068..9474180,9474270..9474351,9474451..9474537,9474676..9474753,9475808..9476014,9477401..9477493,9477564..9477677,9477783..9477953,9478065..9478120,9478206..9478278,9478404..9478594,9478687..9478813,9478895..9478972,9479420..9479584,9486514..9486678,9486757..9486894,9488428..9488571,9489057..9489188,9489314..9489409,9489519..9489656,9489769..9489869,9492587..9492706,9493221..9493353,9495727..9495810)
Gene	LOC18100107
GeneID	18100107
Organism	Populus trichocarpa

Protein

Length	1884aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_006381293.2
Definition	nuclear pore complex protein NUP205 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex protein
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCATCCCCAAAACAACTCCTCTCCACCATCGAATCCACACTTCTAAATCCTTCGCCACCGTCAGCGGCGGAGAGAGTCGAACTAATGCACGCTATTCGCAGCTCTCTCCCGTCTCTGCAAGCGCTCCTCTTCTACCCGCCTCCCAAACCATCGGACCGCGCACAAGTCGTCCAGTCGAAAGAAGTTAGGCTGCCGGATTCACCAGCAATCTCACTAGATGATCAGGATGTGCAAATTGCATTGAAATTGAGTGATGACCTCCATCTTAACGAAATAGAGTGTGTTCGATTGCTGGTTTCTGCCAATCAAGAGTGGGGTTTAATGGCACGGGAGCCATTAGAAATTCTGCGGCTTGCAGCAGGACTTTGGTACACTGAGAGACGAGATCTAATAACAGCCCTGCATATGCTATTAAGGGCTGTAGTGCTTGATCGAGGACTTGAAGATGATATCGTGTCAGACATCCAGAAGTATCTTGAAGATCTAATCAATGGTGGGCTTCGACAGCGATTGATTTCTCTAATAAAGGAACTCAATCTGGAAGAACCAGCTGGTTTTGGTGGGCCTCTTTGTGAGCATTATGTCCTTGATTCTAGAGGTGCTCTTGTTGAGCGTCAAGCTGTGGTTTGTAGAGAGAGATTGATACTTGGACATTGCCTTGTCCTCTCTGTTCTGGTTGTGCGGACAAGTCCAAAAGATGTAAAGGATATTTTTAATTGTTTAAAAGATAGTGCAGCTGAACCTATGGAGGGCACCAACACATTAAAACATCAGATTACATTCAGTCTGCTTTTCTCTCTTGTAATTGCCTTCATATCAGATGCTCTGAGTGCCGTTCCTGATAAAGGATCTATCCTGTCTCATGATGCTTCTTTTAGAAAAGAATTTCATGAAATTGTGATGGCTGTTGGAAACAATCCAAACGTGGAGGGCTTTGTTGGTGTTGTAAGACTTGCTTGGTGTGTGCATTTGATGTTAATAAATGATGGCGTTTCAGCTTCTTCATCAAATAATTCAGGCTATGTAAATTCGTGCCTTGAATTCATTTTCTCACACAATGTTTTTCAGTTTTTACTGGATAACATTCTTCGAACAGCAGCCTACCAGAATGATGACGAGGATATGATCTACATGTACAATGCTTATATGCACAAGCTGACTACTTGCTTACTCTCTCACCAACTTGTGAGGGATAAGGTAAAAGAATCTAAGGACAAGGCAATGAGCACGCTCAACTCATACCGTTTGGCTGTTTCACAAGATCTTATGCATGATAGCAACCCGGATTCACAACAGGCCACCGAAACTGGTCCTCTGCTGTTTGTCTCTCTGCTGGAGTTTGTGAGCGAAATTTATCAGAAAGAACCAGAGCTATTGTCTGGCAATGATGTTTTGTGGACATTTGTCAATTTTGCTGGAGAGGATCATACTAATTTTCAAACACTTGTAGCCTTTTTAAAAATGCTGAGTGCTCTGGCTTCAAGTCAAGAAGGTGCTGCAAAGGTTTATGAGTTACTTCAGGGAAACGCCTTCCGTTCTGTTGGGTGGAGCACTTTGTTTGATTGCTTAACTATATATGACGAGAAGTTCAAACAGTCAGTTGCTGGAACCATGCTACCAGAGTTTCAGGAAGGGGATGCAAAAGCACTGGTTGCATATCTGGATGTTCTTCAAAAGGTTATTGAAAATGGGAATCCTGTGGATAGAAAAAACTGGTTTCCTGACATTGAACCATTGTTCAAGCTCCTTAGTTATGAAAATGTGCCTCCATATTTGAAGGGTGCTCTGCGGAATGCTATAGCTACTTTTGTTCATGTCTCTCCAGTCCTAAAAGATGCTATTTGGAGTTATCTTGAGCAGTATGATTTACCTGTGGTTGTTGGGGCTCAGGTTGGAAACATTGCACAGCCGACAGGAACACAGGTTTATGATATGCAATATGAGTTGAATGAAATAGAAGCAAGGAGAGAACGATATCCTTCGACAATATCTTTCCTTAACTTGTTAAATGCTCTCATTGGTGAGGAAAAAGATGTGAGCGATAGAGGGCGTAGATTTATAGGCATCTTTAGGTTCATATGTGATCATGTCTTTGGGCCATTCCCTCAGAGAGCCTATGCAGATCCTTGCGAGAAATGGCAGTTAGTTGTTTCTTGTCTTCAACATTTTCACATGATGTTGAGCATGTATGAAATTGAAGATGAGGACATTGACAGTGTTGTTGACCTGTCACAGCTTTCAACAGGCACGCAACCATCTTCGCTTCAGATGCAGCTTCCGGTCTTAGAGTTGTTAAAAGATTTCATGAGTGGCCGGATTGTTTTTCGAAATATCATGGGCATCCTTCTGCCAGGGGTAAATTCTATTATCACTGAACGGACTTCTCAAATTTATGGGCAACTGCTTGAAAAGGCTGTACAACTTTCTTTGGAGATTATAATTCTTGTCCTTGAAAAGGATTTACTAGTTTCTGATTATTGGCGTCCTCTATACCAGCCTTTGGATGTTATTCTTTCACAAGATCATAATCTAATTGTGGCATTGCTGGAGTATGTCAGATATGATTTTCTACCCAAAATTCAGCAATGCTCAATCAAAATCATGAGTATTCTAAGTTCCCGTGTGGTGGGGCTCGTACAGTTACTGTTGAAATCCAATGCTGCAAACTCTTTGGTTGAGGATTATGCAGCCTGCCTTGAGGTACGATCAGAAGAATGTCAGATTATAGAGAACAAGGTTGATGATCCAGGGGTTCTGATAATGCAGCTCCTAATAGATAACATTAGTCGGCCAGCTCCAAATGTTACACATTTACTGCTTAAATTTGATATTGACCACGCAGTTGAGCGGACAGTTCTGCAACCAAAGTTTCACTACAGTTGCTTGAAGGTTATTCTTGAAATATTGGACAGACTTTTAAAACCTGAAAAGAATGCAATGCTTCATGAGTTTGGTTTTCAGCTCCTTTATGAGTTGTCCGTGGACCCGCTTACATGTGGCCCTACCATGGATTTGCTGAGCAAGAAAAAGTATCAATTCTTTGTAAAGCACCTTGATACTATTGGTATTGCTCCGCTTCCTAAACGGAATAGCAATCAGCCACTTCGCATCAGCTCCCTTCACCAGAGAGCATGGCTCTTGAAGCTTTTAGCTGTAGAATTGCACTCTGGTTATGTGGGTGGCCCCTCTCATCGAGAAGCATGTCAGACCATACTTGCTCATCTTTTTGGACGGGATGTAATTGAAAGTGGGCCTGATCATGTAGTTTATGATTCTGTTATACTTCGAAACGGCACTGAGCATGCTGGAACCCAGACAATAAGCAAGAATAAGGTTTTGGAGTTGCTCGAGGTTATCCAATTTCGATCTCCTGATACTACCATGAAGCTTTCCCAGATTGTTTCCAATATGAAGTATGATTTGATGGCAGAGGAAATACTTGGAGATCCAAGAACTTCAGGAAGGGGCGGTATCTACTACTATTCAGAGCGCGCTGATCGTCTGATTGACCTTGCTTCTTTCCGTGATAAGCTTTGGCAGAAATTCAATTCAGTCTATCCCCAGTTAAGTAACTTTGAAAATGAAGCTGAACTCAATGATGTAAGAGAGACAATTCAACAGTTATTGAGATGGGGGTGGAAGTATAATAAGAACCTTGAGGAACAAGCTGCCCAACTTCATATGTTAACTGGCTGGTCACATATTGTTGAGGTGTCTGCATCCAGAAGAATACATTCACTTGAAAATCGATCTGACATTTTATATCGGGTTCTTGATGCCTCTCTAAGTGCTTCTGCTTCTCGAGACTGTTCATTGAGGATGGCATTTGTATTGAGTCAGGTTGCACTAACATGCATGGCTAAACTACGTGATGAAAGGTTCTTGTGCTCTGGTGGTTTAAATTCAGATAATATGACATGTCTTGATGTTATAACGGCAAAGAAACTATCAAATGGTGCCTGTCACTCAATATTATTTAAGCTTATAATGGCAATTCTGAGAAATGAATCATCAGAATCTCTGAGAAGACGTCAATATGCATTGCTGCTCGGCTATTTTCAGTATTGTCAGCATATGCTTGATCCAAATATCCCAACATCAGTTATGCAATTTTTGATGCTCGAGGAGCAAGATAGTGAAGATCTAGATTTCCAGAAAATTGACAAAGATCAGGCAGAACTAGCTCGTACCAATTTTTCAATTATGAGGAAAGAAGCTCAGGCCATCTTGGATTTGGTAATAAATGATGCAACTAAAGGAAGCGAACCTGGGAAGACAATAGCGCTGTATGTTCTGGTTGCATTAATATGTATTGACCATGAGAGATACTTCTTAAGCCAACTTCAAAGTAGAGGATTTTTAAGGACTTGCCTAACGAGCATCAGCAATTTTTCAAACCAGGATGGCGGGCATTCATTGGATTCATTGCAGCGGGCAAGTACCCTTGAGGCTGAATTGGCATTACTGTTGAGGATTAGCTACAAATATGGGAAATCTGGGGCCCAGGTTTTGTTTTCCATGGGTGCCTTGGAGCATCTTGCATCATGCAGGGCAGTCAGTTTACAGGGATGTTTGAGGCGGTTTGACCGAAAGCTTCGTCGAGATGTTTCTGTAGATTTTGACAAACAATGCATGATTGTAACACCTATGTTGAGATTGTTGTTTTCTTTGACGTCATTGGTTGATACATCTGATATATTCGAGGTGAAGAATAAAATTGTTCGTGAAGTTATAGATTTTGTAAAAGGACATCAGATGCTGTTTGATCAAATTCTTCGTGAAGATATTTCCACAGCTGATGAATTGACTGTGGAGCAGATCAATCTTGTTGTTGGCATACTTTGTAAGGTATGGCCCTATGAAGAGAGTGACGAGTTTGGTTTTGTTCAAGGTCTTTTCAGTATGATGCGTGCTCTTTTTTCTTGTGACTCTGGAGCTCCTACTGTTGGTAAATTGGCCCAATCTTCTGAGGTATCTCAGAATAAAAGCAAGGTAGAACTGAACTCGTTTCGGCTATGCTTCAGTCTGGGCTCTTACCTATATTTCTTAGTCACAAAAATGTCTCTGAGACTCCAGGTCTCAGACAGCTCCATAGATTACCATTCCCCTGCTATGCTGCAGCAGCCCACATTGATGTTACTTGACTCTCTCCTCCGTTCAGTTGCAACTTCCCTTGAAATGGCTGCTGAGGAGAAATCCTTACTTCTTAATAAGATTCAAGATATAAATGAACTGTCAAGGCAGGAGGTGGATGAGATTATCAACATGTGTGTTATGCAAGAGTCTGTTTCTTCATCCGATGACATACAGAAGAGGAGGTATATCGCAATGATGGAAATGTCCCGTGTAGCTGGCGAAAGAGATCAGCTAATTACATTGTTACTTCCACTTGCAGAACATGTGCTGGATATCATCCTTGTCCATTTTCGTGAAGGGTCCATGGCATCTGATAATAGTGGAGCTACAAAAGCAGTTACATTTGGCACACACTCTGACCCCAGACAGGATCTATCTTGGATGTGCGGGATGTTGGTTCCCACGTTAGAACGACTTGAACTGTTGAGTGAGGATAAGGTCGGCCACAATCTGAAGGTGTTTCGAAGATTGGTGACATCCCTTAAAGAAATGGCAATCCAAAACCTGGCTTTATGA

Protein:   MASPKQLLSTIESTLLNPSPPSAAERVELMHAIRSSLPSLQALLFYPPPKPSDRAQVVQSKEVRLPDSPAISLDDQDVQIALKLSDDLHLNEIECVRLLVSANQEWGLMAREPLEILRLAAGLWYTERRDLITALHMLLRAVVLDRGLEDDIVSDIQKYLEDLINGGLRQRLISLIKELNLEEPAGFGGPLCEHYVLDSRGALVERQAVVCRERLILGHCLVLSVLVVRTSPKDVKDIFNCLKDSAAEPMEGTNTLKHQITFSLLFSLVIAFISDALSAVPDKGSILSHDASFRKEFHEIVMAVGNNPNVEGFVGVVRLAWCVHLMLINDGVSASSSNNSGYVNSCLEFIFSHNVFQFLLDNILRTAAYQNDDEDMIYMYNAYMHKLTTCLLSHQLVRDKVKESKDKAMSTLNSYRLAVSQDLMHDSNPDSQQATETGPLLFVSLLEFVSEIYQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLKMLSALASSQEGAAKVYELLQGNAFRSVGWSTLFDCLTIYDEKFKQSVAGTMLPEFQEGDAKALVAYLDVLQKVIENGNPVDRKNWFPDIEPLFKLLSYENVPPYLKGALRNAIATFVHVSPVLKDAIWSYLEQYDLPVVVGAQVGNIAQPTGTQVYDMQYELNEIEARRERYPSTISFLNLLNALIGEEKDVSDRGRRFIGIFRFICDHVFGPFPQRAYADPCEKWQLVVSCLQHFHMMLSMYEIEDEDIDSVVDLSQLSTGTQPSSLQMQLPVLELLKDFMSGRIVFRNIMGILLPGVNSIITERTSQIYGQLLEKAVQLSLEIIILVLEKDLLVSDYWRPLYQPLDVILSQDHNLIVALLEYVRYDFLPKIQQCSIKIMSILSSRVVGLVQLLLKSNAANSLVEDYAACLEVRSEECQIIENKVDDPGVLIMQLLIDNISRPAPNVTHLLLKFDIDHAVERTVLQPKFHYSCLKVILEILDRLLKPEKNAMLHEFGFQLLYELSVDPLTCGPTMDLLSKKKYQFFVKHLDTIGIAPLPKRNSNQPLRISSLHQRAWLLKLLAVELHSGYVGGPSHREACQTILAHLFGRDVIESGPDHVVYDSVILRNGTEHAGTQTISKNKVLELLEVIQFRSPDTTMKLSQIVSNMKYDLMAEEILGDPRTSGRGGIYYYSERADRLIDLASFRDKLWQKFNSVYPQLSNFENEAELNDVRETIQQLLRWGWKYNKNLEEQAAQLHMLTGWSHIVEVSASRRIHSLENRSDILYRVLDASLSASASRDCSLRMAFVLSQVALTCMAKLRDERFLCSGGLNSDNMTCLDVITAKKLSNGACHSILFKLIMAILRNESSESLRRRQYALLLGYFQYCQHMLDPNIPTSVMQFLMLEEQDSEDLDFQKIDKDQAELARTNFSIMRKEAQAILDLVINDATKGSEPGKTIALYVLVALICIDHERYFLSQLQSRGFLRTCLTSISNFSNQDGGHSLDSLQRASTLEAELALLLRISYKYGKSGAQVLFSMGALEHLASCRAVSLQGCLRRFDRKLRRDVSVDFDKQCMIVTPMLRLLFSLTSLVDTSDIFEVKNKIVREVIDFVKGHQMLFDQILREDISTADELTVEQINLVVGILCKVWPYEESDEFGFVQGLFSMMRALFSCDSGAPTVGKLAQSSEVSQNKSKVELNSFRLCFSLGSYLYFLVTKMSLRLQVSDSSIDYHSPAMLQQPTLMLLDSLLRSVATSLEMAAEEKSLLLNKIQDINELSRQEVDEIINMCVMQESVSSSDDIQKRRYIAMMEMSRVAGERDQLITLLLPLAEHVLDIILVHFREGSMASDNSGATKAVTFGTHSDPRQDLSWMCGMLVPTLERLELLSEDKVGHNLKVFRRLVTSLKEMAIQNLAL